Research Summary
Conducts research in the areas of genomics, conservation genetics and biotechnology. Genomics research identifies genes, DNA markers and quantitative trait loci governing growth, stress resistance, and plant-microbe interactions in hardwood tree species.
Research Keywords
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Projects
Recent Publications
A high-quality reference genome for Fraxinus pennsylvanica for ash species restoration and research
Huff, M., Seaman, J., Di, W., Zhebentyayeva, T., Kelly, L. J., Faridi, N., Nelson, C. D., Cooper, E., Best, T., Steiner, K., Koch, J., Romero Severson, J., Carlson, J. E., Buggs, R. & Staton, M., 2021, (Accepted/In press) In: Molecular Ecology Resources.Research output: Contribution to journal › Article › peer-review
Use of genomic resources to assess adaptive divergence and introgression in oaks
Lazic, D., Hipp, A. L., Carlson, J. E. & Gailing, O., Jun 2021, In: Forests. 12, 6, 690.Research output: Contribution to journal › Article › peer-review
Corrigendum to Phylogenetic analysis based on chloroplast genome uncover evolutionary relationship of all the nine species and six cultivars of tree peony [Industrial Crops and Products 153 October (2020) 112567] (Industrial Crops & Products (2020) 153, (S0926669020304830), (10.1016/j.indcrop.2020.112567))
Guo, L., Guo, S., Xu, J., He, L., Carlson, J. E. & Hou, X., Oct 15 2020, In: Industrial Crops and Products. 154, 112710.Research output: Contribution to journal › Comment/debate › peer-review
Phylogenetic analysis based on chloroplast genome uncover evolutionary relationship of all the nine species and six cultivars of tree peony
Guo, L., Guo, S., Xu, J., He, L., Carlson, J. E. & Hou, X., Oct 1 2020, In: Industrial Crops and Products. 153, 112567.Research output: Contribution to journal › Article › peer-review
Transcriptome profiles of Quercus rubra responding to increased O3 stress
Soltani, N., Best, T., Grace, D., Nelms, C., Shumaker, K., Romero-Severson, J., Moses, D., Schuster, S., Staton, M., Carlson, J. & Gwinn, K., Feb 14 2020, In: BMC genomics. 21, 1, 160.Research output: Contribution to journal › Article › peer-review
Inter-specific hybridization of Alnus rubra and Alnus rhombifolia: preliminary report of a new taxon and DNA marker resources for bioenergy feedstock production
Stanton, B. J., Best, T., Islam-Faridi, N., Gantz, C., Haiby, K., Johnson, L. J., Shuren, R., Stanish, A., Staton, M., Weathers, T. C., Wu, D. & Carlson, J. E., Oct 1 2020, In: Tree Genetics and Genomes. 16, 5, 70.Research output: Contribution to journal › Article › peer-review
“A reference genome assembly and adaptive trait analysis of Castanea mollissima ‘Vanuxem,’ a source of resistance to chestnut blight in restoration breeding”
Staton, M., Addo-Quaye, C., Cannon, N., Yu, J., Zhebentyayeva, T., Huff, M., Islam-Faridi, N., Fan, S., Georgi, L. L., Nelson, C. D., Bellis, E., Fitzsimmons, S., Henry, N., Drautz-Moses, D., Noorai, R. E., Ficklin, S., Saski, C., Mandal, M., Wagner, T. K., Zembower, N. & 8 others, , Aug 1 2020, In: Tree Genetics and Genomes. 16, 4, 57.Research output: Contribution to journal › Article › peer-review
Transcriptome analysis of contrasting resistance to herbivory by Empoasca fabae in two shrub willow species and their hybrid progeny
Wang, W., Carlson, C. H., Smart, L. B. & Carlson, J. E., Jul 2020, In: PloS one. 15, 7 July, e0236586.Research output: Contribution to journal › Article › peer-review
Factoring Ecological, Societal, and Economic Considerations into Inoculant Development
Bell, T. H., Kaminsky, L. M., Gugino, B. K., Carlson, J. E., Malik, R. J., Hockett, K. L. & Trexler, R. V., Jun 2019, In: Trends in Biotechnology. 37, 6, p. 572-573 2 p.Research output: Contribution to journal › Article › peer-review
Manipulating Wild and Tamed Phytobiomes: Challenges and Opportunities
Bell, T. H., Hockett, K., Alcalá-Briseño, R. I., Barbercheck, M., Beattie, G. A., Bruns, M. A., Carlson, J., Chung, T., Collins, A., Emmett, B., Esker, P., Garrett, K., Glenna, L., Gugino, B. K., Jimenez Gasco, M. D. M., Kinkel, L., Kovac, J., Kowalski, K., Kuldau, G., Leveau, J. & 10 others, , Mar 13 2019, In: Phytobiomes Journal.Research output: Contribution to journal › Article › peer-review