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Recent Publications
Nematode predation modulates the energetic dynamics of soil micro-food webs with consequences for soil multifunctionality
Zheng, J., Peng, Z., Dini-Andreote, F., Barnes, A. D., Shi, G., Potapov, A. M., Zhou, S. & Jiang, Y., Jan 2026, In: Soil Biology and Biochemistry. 212, 110019.Research output: Contribution to journal › Article › peer-review
Interplay of ecological processes modulates microbial community reassembly following coalescence
Bresciani, L., Custer, G. F., Koslicki, D. & Dini-Andreote, F., Jan 1 2025, In: ISME Journal. 19, 1, wraf041.Research output: Contribution to journal › Article › peer-review
Leveraging by-products of the agri-food industry for the application of anaerobic soil disinfestation in organic high tunnel vegetable production
Di Gioia, F., Ono-Raphel, J., Arrington, K., Balaguer, R., Dini-Andreote, F., Kaye, J. P. & Rosskopf, E., May 2025, In: Acta Horticulturae. 1, 1428, p. 63-70 8 p.Research output: Contribution to journal › Article › peer-review
Microbial drivers of root plasticity
Dini-Andreote, F., Wells, D. M., Atkinson, J. A., Atkinson, B. S., Finkel, O. M. & Castrillo, G., Oct 2025, In: New Phytologist. 248, 1, p. 52-67 16 p.Research output: Contribution to journal › Review article › peer-review
Plant-microbe interactions amid global change
Dini-Andreote, F., Aug 13 2025, In: Cell Host and Microbe. 33, 8, p. 1217-1221 5 p.Research output: Contribution to journal › Comment/debate › peer-review
Ecologically expanding the One Health framework to unify the microbiome sciences
Ginnan, N., Crandall, S. G., Imchen, M., Dini-Andreote, F., Miyashiro, T. I., Singh, V., Ganda, E. & Bordenstein, S. R., Jun 2025, In: mBio. 16, 6Research output: Contribution to journal › Review article › peer-review
Engineering the mangrove soil microbiome for selection of polyethylene terephthalate-transforming bacterial consortia
Jiménez, D. J., Chaparro, D., Sierra, F., Custer, G. F., Feuerriegel, G., Chuvochina, M., Diaz-Garcia, L., Mendes, L. W., Ortega Santiago, Y. P., Rubiano-Labrador, C., Salcedo Galan, F., Streit, W. R., Dini-Andreote, F., Reyes, A. & Rosado, A. S., Jan 2025, In: Trends in Biotechnology. 43, 1, p. 162-183 22 p.Research output: Contribution to journal › Article › peer-review
Targeted manipulation of food webs in the plant rhizosphere
Luan, L., Dini-Andreote, F., Zhou, S. & Jiang, Y., May 2025, In: Trends in Plant Science. 30, 5, p. 457-460 4 p.Research output: Contribution to journal › Short survey › peer-review
Unveiling the ecological processes driving soil and lichen microbiome assembly along an urbanization gradient
Mawarda, P. C., van der Kaaij, R., Dini-Andreote, F., Duijker, D., Stech, M. & Speksnijder, A. G. C. L., Dec 2025, In: npj Biofilms and Microbiomes. 11, 1, 99.Research output: Contribution to journal › Article › peer-review
Effects of carbon sources on soil bacterial community dynamics during anaerobic soil disinfestation in an organic tomato production system
Ono-Raphel, J. G., Custer, G. F., Arrington, K., Morrison, B., Kaye, J., Rosskopf, E., Dini-Andreote, F. & Di Gioia, F., Apr 1 2025, In: Agriculture, Ecosystems and Environment. 381, 109448.Research output: Contribution to journal › Article › peer-review
Functional adaptations of the rhizosphere microbiome for drought-tolerance promotion in common bean
Silva, A. V. R. D., Cunha, I. D. C. M., Pellegrinetti, T. A., Boleta, E. H. M., Zagatto, L. F. G., Zagatto, S. D. S. S., Nishisaka, C. S., Mafra, T. M. L., Patreze, C. M., Custer, G. F., Dini-Andreote, F., Mendes, R., Tsai, S. M. & Mendes, L. W., Jun 2025, In: Plant Stress. 16, 100860.Research output: Contribution to journal › Article › peer-review
Revisiting the cry-for-help hypothesis in plant–microbe interactions
Tharp, C. L., Custer, G. F., Castrillo, G. & Dini-Andreote, F., 2025, (Accepted/In press) In: Trends in Plant Science.Research output: Contribution to journal › Short survey › peer-review
Impacts of trophic interactions on carbon accrual in soils
Wang, X., Liang, C., Dini-Andreote, F., Zhou, S. & Jiang, Y., Mar 2025, In: Trends in Microbiology. 33, 3, p. 277-284 8 p.Research output: Contribution to journal › Review article › peer-review
Molecular activity mediates the composition and assembly of dissolved organic matter in lake sediments
Wen, S., Hu, A., Dini-Andreote, F., Han, L., Jiang, S., Jang, K. S. & Wang, J., May 2025, In: Limnology and Oceanography. 70, 5, p. 1196-1209 14 p.Research output: Contribution to journal › Article › peer-review
Keystone Pseudomonas species in the wheat phyllosphere microbiome mitigate Fusarium head blight by altering host pH
Xu, Y., Wang, Z., Wu, J., Yue, Y., Ren, Y., Pan, Y., Li, J., Liu, C., Borriss, R., Liu, X., Qiao, J., Lee, Y. W., Wu, H., Dini-Andreote, F., Shen, Q., Xiong, W., Gao, X., Berendsen, R. L. & Gu, Q., Dec 10 2025, In: Cell Host and Microbe. 33, 12, p. 2052-2066.e4Research output: Contribution to journal › Article › peer-review